PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011085206.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NF-YA
Protein Properties Length: 172aa    MW: 19197.6 Da    PI: 7.7754
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011085206.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA48.92.1e-15108142136
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36 
                     +ep++VNaKQy++Il+RRq+Rak+ +e+kl +k rk
  XP_011085206.1 108 EEPVFVNAKQYHGILRRRQSRAKAGSEHKL-AKPRK 142
                     69****************************.77777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005214.5E-7106167IPR001289Nuclear transcription factor Y subunit A
PROSITE profilePS5115215.507107142IPR001289Nuclear transcription factor Y subunit A
PfamPF020451.4E-11109143IPR001289Nuclear transcription factor Y subunit A
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MTSSVHSLSD NSETDEQHKG RDLPASPSYG MSHPGIALPM MHYVASSQLG LGNAQTAYPY  60
PDPYYRSIFA PCDTHPYPSQ PYAPRPMVNL QLMGIQQAGL PLPSDSVEEP VFVNAKQYHG  120
ILRRRQSRAK AGSEHKLAKP RKEGSDMTHK LHPTENYMVL QYMCFAANTE NH
Functional Description ? help Back to Top
Source Description
UniProtStimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011085206.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020551303.11e-126nuclear transcription factor Y subunit A-7 isoform X5
SwissprotQ84JP13e-37NFYA7_ARATH; Nuclear transcription factor Y subunit A-7
TrEMBLA0A022PWC75e-65A0A022PWC7_ERYGU; Uncharacterized protein
STRINGMigut.M01893.1.p8e-64(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66502333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.21e-39nuclear factor Y, subunit A7
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhao H, et al.
    The Arabidopsis thaliana Nuclear Factor Y Transcription Factors.
    Front Plant Sci, 2016. 7: p. 2045
    [PMID:28119722]