PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011085885.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 436aa    MW: 47815.8 Da    PI: 8.1773
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011085885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.84.2e-32267320255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  XP_011085885.1 267 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 320
                     9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.51E-15264320IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.8E-28265320IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-23267320IPR006447Myb domain, plants
PfamPF002497.9E-7268319IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009887Biological Processorgan morphogenesis
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0009956Biological Processradial pattern formation
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010158Biological Processabaxial cell fate specification
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MPLEGIFLEP SSKPVPDLSL HISLPNCDSS SSSRSSNTKN DAVSSFDLPV NISSKPKGCT  60
SFTDLSLAHP ANDEKVELSN SFGRTHQEQE QPQNPYHHHH HRIYQPNHQL NHHQINHGDS  120
PFDSSDGLRP IKGIPVYPNP PFPFLALDHS TREKDPKMRF YQMSYPSWSS PSSSSSSSSS  180
PFFGGGLDHH MPLLNLGPNG SSTAAAYHCG GGGGGRFSGL SSYQLHHHHN HHHQYGMGVS  240
HHEGSHHGIM RSRFLPKMPA KRSMRAPRMR WTSTLHARFV HAVELLGGHE RATPKSVLEL  300
MDVKDLTLAH VKSHLQMYRT VKTTDKPAAS SGHSDGSGED DLSTIGSGSA DRTGLRQFME  360
QRGPSDVSPR QESDVNNYPA ATLWSNSSSS REGSWLQTNA GETSHSLIGS TPFPSQSTSG  420
HLMRKAASKE LCNVQF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-16268322458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-16268322458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-16268322357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-16268322357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-16268322357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-16268322357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-16268322458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-16268322458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-16268322458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-16268322458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-16268322458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-16268322458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011085885.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011085885.10.0transcription repressor KAN1 isoform X1
TrEMBLA0A3G1Z1J60.0A0A3G1Z1J6_SESIN; Transcription repressor KAN1
STRINGVIT_04s0043g00340.t011e-130(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24682355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.12e-50G2-like family protein