PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011086052.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Dof

Protein Properties

Length: 327aa MW: 35413.2 Da PI: 7.3794

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011086052.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.9	5.3e-39	55	114	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + lkcprCds+ntkfCyynnyslsqPryfCkaC+ryWt+GG+lrnvPvGgg+rknk+++ XP_011086052.1 55 QPPLKCPRCDSSNTKFCYYNNYSLSQPRYFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 114 5679*****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-27	52	112	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.1E-33	57	112	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.348	58	112	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	60	96	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MPAANCENLY TTATSSPTHQ CPQKQIVADV QNSSFPSSSP TNNSVMQRSN QDPHQPPLKC 60 PRCDSSNTKF CYYNNYSLSQ PRYFCKACKR YWTRGGTLRN VPVGGGCRKN KRVKQRQLAP 120 SIGSDGISSS SSSAAASTAI IKPSSVQPDI DLSPAPNLIN EPLLYSLPTN PFELNFPFSR 180 FSTARVSCDS SGFDHHQPGM NGVGIGFSSG ILEKGDYRNG FRQIEDVITS SAGNVNSLFF 240 GPSNFGPTST MVSLLSSPHQ EANDFHGEDM QMQNGGLMGK EVKIEGENRS DFNSSDSSSL 300 LWNSSTSLGE WFDPSNIMGS SSVPSLI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011086052.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KJ073762	4e-58	KJ073762.1 Sesamum indicum clone TilSSR_44963 microsatellite Sesame_44963 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011086052.1	0.0	dof zinc finger protein DOF1.4-like
TrEMBL	A0A2Z7CZ08	2e-78	A0A2Z7CZ08_9LAMI; Uncharacterized protein
STRING	XP_006467767.1	3e-68	(Citrus sinensis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	3e-34	TARGET OF MONOPTEROS 6