PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011086053.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Dof

Protein Properties

Length: 278aa MW: 30339.6 Da PI: 9.852

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011086053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.7	2.3e-37	32	89	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +kcprCds+ntkfCyynnyslsqPry+Ck+CrryWt+GG+lrnvPvGgg+rk k+s XP_011086053.1 32 PPRKCPRCDSSNTKFCYYNNYSLSQPRYYCKTCRRYWTHGGTLRNVPVGGGCRKIKRS 89 5689**************************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	2.5E-32	34	88	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.723	34	88	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	36	72	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-20	40	87	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence Send to blast
MERERNEENN LRQQQDPGRQ MAANDHHQPP PPPRKCPRCD SSNTKFCYYN NYSLSQPRYY 60 CKTCRRYWTH GGTLRNVPVG GGCRKIKRSR TSSSSFSSSE IARTQCSSPA LPSQNLTGMI 120 SGQVVRPVPR VIPTAGNSFY TGRACLPSLG TMQSLPGEIN QRASVNLDGG NNQFGANMAL 180 LQGLSFQTLR PQTANQFQPQ AHYFPSQQSL VPPRPPLSSW TQSLINPGAS SSSSANSSIW 240 SSATGCNIAD GSNQAAGSSF STGQWADNHH PGFNPPHH

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011086053.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011086053.1	0.0	dof zinc finger protein DOF2.2-like
TrEMBL	A0A2G9GQ55	8e-82	A0A2G9GQ55_9LAMI; Uncharacterized protein
STRING	Migut.M01126.1.p	8e-64	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	3e-26	TARGET OF MONOPTEROS 6