PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011086065.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 165aa    MW: 18645.3 Da    PI: 6.9692
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011086065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.50.0005818532055
                    HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 20 feeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    ++eL +llP++++++   l   ++L + v+YIk+Lq
  XP_011086065.1 18 LSELSSLLPHQPQEGVVSLLPEQVLAESVDYIKKLQ 53
                    789*******767888888889*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.4E-52066IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MDRNLSSSKH TTKKMKELSE LSSLLPHQPQ EGVVSLLPEQ VLAESVDYIK KLQEKLEKLK  60
HKKSCLMRMS ENSATDHLKT LNISISVSGS ALDVVLRTGL DYQFMYARVI RMLHEEGAEV  120
VNASFSVVDD TIFHNIHSEV NGEHGLERVA ARISERLRKF VSDVD
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011086065.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086065.11e-117uncharacterized protein LOC105167900
TrEMBLA5C0F43e-43A5C0F4_VITVI; Uncharacterized protein
STRINGXP_008225174.12e-42(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51052131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-15bHLH family protein