PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011086192.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family G2-like
Protein Properties Length: 308aa    MW: 34464.2 Da    PI: 9.1704
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011086192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.81e-3251104255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWt++LH++F++ave+LGG+++AtPk +lelm+vkgLt++hvkSHLQ+YR+
  XP_011086192.1  51 PRLRWTHDLHQCFINAVERLGGEDRATPKMVLELMNVKGLTITHVKSHLQMYRS 104
                     8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.16447107IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.2E-3147106IPR009057Homeodomain-like
SuperFamilySSF466891.34E-1549105IPR009057Homeodomain-like
TIGRFAMsTIGR015575.9E-2651105IPR006447Myb domain, plants
PfamPF002491.7E-852103IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MDSPPALSTL NMIPAADRSL DGFFVSQPEI NRHPPPTKAA GVRPYVRSKM PRLRWTHDLH  60
QCFINAVERL GGEDRATPKM VLELMNVKGL TITHVKSHLQ MYRSMKHEQM LQEVEAAEAA  120
AGKNKKTEAI PQPNYFQISG SSQYSNSQNP DMLSITKDAP FQDQHCACFY STSHVSDNTR  180
PRPPIWQEVK LKAMETEANI VPPFYHPDNG QRFNYSIMLR DLFRGCKPPL TNTTSLATVG  240
LHAQVRTPDV INVRRSKEKQ VVLRDLNSGS KQSSFVSGCP RALRVEPRGL GPSESTDTND  300
VSLELTLG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A8e-1852107459Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B8e-1852107459Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A9e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B9e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C9e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D9e-1852107358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A8e-1852107459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C8e-1852107459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D8e-1852107459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F8e-1852107459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H8e-1852107459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J8e-1852107459Protein PHOSPHATE STARVATION RESPONSE 1
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011086192.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086192.10.0uncharacterized protein LOC105167992
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74502029
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.12e-30G2-like family protein