PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011086321.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 217aa    MW: 25661.1 Da    PI: 6.2395
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011086321.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1293.7e-40321631127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                     +ppG+rF Ptd elv  yL++k+   +    +++ + +v +y+++P++L +   k++ ++++wyfF++r ++y++g+r++r++ +gyWka gkd+
  XP_011086321.1  32 MPPGMRFLPTDVELVRVYLRHKLIVGSlpQGFQKLFLDVALYQHNPQQLIAmheKLEDDQEDWYFFTPRIRRYPNGQRPERTAGDGYWKAIGKDT 126
                     79********************77776434455569*************733446667888********************************** PP

             NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                     +v++++ge++g k++L fy+gr+p g+kt+W mhey 
  XP_011086321.1 127 PVVENDGEVIGFKRVLDFYEGRHPGGVKTEWKMHEYL 163
                     ************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-4727189IPR003441NAC domain
PROSITE profilePS5100546.58532190IPR003441NAC domain
PfamPF023652.8E-2033162IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MEEQPLVHHP PEYYDNLMNG ADYCERIMSE PMPPGMRFLP TDVELVRVYL RHKLIVGSLP  60
QGFQKLFLDV ALYQHNPQQL IAMHEKLEDD QEDWYFFTPR IRRYPNGQRP ERTAGDGYWK  120
AIGKDTPVVE NDGEVIGFKR VLDFYEGRHP GGVKTEWKMH EYLTKEQKDH TPASTSMQLN  180
QWVLCKIYKN KRSGKKRKSS MDHVEDDDDF FSFDFPM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-383219615174Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011086321.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086321.11e-164NAC transcription factor 56-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-39NAC-like, activated by AP3/PI