PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011087020.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Dof

Protein Properties

Length: 296aa MW: 32266 Da PI: 7.5592

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011087020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	111.6	3.5e-35	46	103	2	59
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 +++ l+cprC stntkfCyynny+ sqPr+fCk+C+r+WtkGG+lrnvPvGggr++++ XP_011087020.1 46 QSEPLNCPRCGSTNTKFCYYNNYNKSQPRHFCKSCKRHWTKGGTLRNVPVGGGRKNKR 103 56889***********************************************977665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-24	43	103	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.6E-31	49	102	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.391	50	104	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	52	88	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence Send to blast
MGLGTELQVS GDHQQGLDWG QPLLQSGKAE LAKPPSGRRQ QPLKQQSEPL NCPRCGSTNT 60 KFCYYNNYNK SQPRHFCKSC KRHWTKGGTL RNVPVGGGRK NKRPKISHPT TTTSTTTVTA 120 TAASPATATR LHDRASFPYT NISTDQRSMS NILYKALICS SSPSLLHNAT DGINISIPGK 180 PLVGSNGISN KTGFTEVPFS SLSTTFEVMN SSLMNPTPHQ LLDDHIDHYA GNIDSTEESI 240 ITTLDIPSTA SAAWPVADTS SVMDLPNYWN WNEIDAFTSS ADLNIAWDDI DAEIKP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011087020.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087020.2	0.0	dof zinc finger protein DOF5.8-like
TrEMBL	A0A2G9HFL0	8e-95	A0A2G9HFL0_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6171	20	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	6e-29	DOF zinc finger protein 1