PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011087134.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

HB-other

Protein Properties

Length: 130aa MW: 15386.2 Da PI: 6.5339

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011087134.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	34.1	4.5e-11	4	54	6	56
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +f+k q+++L+ +Fe++ ++++e++ eL + +gL+ +q++ WF rR +++ XP_011087134.1 4 RFEKFQIDALNLAFEESDHLTKEKKIELMRATGLDMEQITSWFNRRRSQKR 54 699****************************************98888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	12.471	1	56	IPR001356	Homeobox domain
SMART	SM00389	1.6E-5	2	60	IPR001356	Homeobox domain
SuperFamily	SSF46689	5.13E-11	3	63	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	4.5E-12	4	61	IPR009057	Homeodomain-like
CDD	cd00086	7.89E-8	4	54	No hit	No description
Pfam	PF00046	1.7E-8	4	54	IPR001356	Homeobox domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 130 aa Download sequence Send to blast
MAKRFEKFQI DALNLAFEES DHLTKEKKIE LMRATGLDME QITSWFNRRR SQKRARESRG 60 DLERTNAELQ QALQESKERE ARLQQELEES RRREVELGAV IHHLRQQLGV VEADSGIDPD 120 LRFVNEHTRT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011087134.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011087134.2	3e-82	homeobox-leucine zipper protein ATHB-20-like
TrEMBL	A0A2G9I714	7e-43	A0A2G9I714_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15650	4	7