PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011087814.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 250aa    MW: 27189 Da    PI: 7.6393
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011087814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.83.2e-15169228463
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      +++rr++kNRe+A rsR+RK+a++ eLe  v  Le+eN +L +e  el+k+ +k  +e+
  XP_011087814.1 169 QQKQRRMIKNRESAARSRERKQAYTLELESLVTHLEEENARLLEEEAELNKKRYKQLMEN 228
                     689******************************************999999998877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-13166230IPR004827Basic-leucine zipper domain
PfamPF001704.4E-14168228IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.323168220IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.69E-11170221No hitNo description
CDDcd147071.69E-20170217No hitNo description
Gene3DG3DSA:1.20.5.1706.4E-14171226No hitNo description
PROSITE patternPS000360173188IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MASSKVMASR SPPNPDHPPH PSFPTPLNIL HPDQTRGFGA SMNIDDMLTN IYSHPDSFAL  60
HNAFMLRDGA GPGEPAMTLE DFLAKAGAVT EEDVCLPPTG VFGVETAMLS AAAAATGVPV  120
ACVQNGVASG RFGVDFPNGV LAVGGGAGGC GRGKRKVAVE EVPLDKATQQ KQRRMIKNRE  180
SAARSRERKQ AYTLELESLV THLEEENARL LEEEAELNKK RYKQLMENLI PVVEKRRPPR  240
ALRKIHSMEW
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011087814.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0762312e-56KJ076231.1 Sesamum indicum clone TilSSR_47432 microsatellite Sesame_47432 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087814.10.0G-box-binding factor 4
SwissprotP427773e-37GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A2G9H7R32e-93A0A2G9H7R3_9LAMI; Uncharacterized protein
STRINGMigut.B00653.1.p2e-84(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27712452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.13e-25bZIP family protein