PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011088156.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 372aa    MW: 41147.5 Da    PI: 4.8478
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011088156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-102953351055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_011088156.1 295 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 335
                     9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.224285334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-14285350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-12290344IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-11291340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.05E-11294339No hitNo description
PfamPF000101.2E-7295335IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0016049Biological Processcell growth
GO:0048766Biological Processroot hair initiation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MEHVGAISGG EWNPLNGMCS DEADFMAQLL GNCSLPNEVP SSSNFPLSSA FWPAHESNEE  60
IAVDETAMYS SDETNTSMYS FSQGSSYSGS SGILFPHPSH ESYYPCVSHQ VFMTNNSMMT  120
MDYYMEGKNN SSRIHILSTN VTEGDDFLNQ DISNDSTVSN QNMSEDVFQG KDLQLEQEPA  180
VPMLELVKED KVSSPSESKK RSRAPAELPR NKRSTKIKKC LKLDDNGNDN NSNHIALLRR  240
QSSSSYSSED DSNASHELNG VTSSSSSKGS AALNLNGKTR ASRGSATDPQ SLYARKRRER  300
INERLRILQN LVPNGTKVDI STMLEEAVQY VKFLQLQIKL LSSDDLWMYA PIAYNGMDIG  360
LDLKISTPKP QS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011088156.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088156.10.0transcription factor bHLH139-like
TrEMBLA0A022RB651e-154A0A022RB65_ERYGU; Uncharacterized protein
STRINGMigut.B00443.1.p1e-142(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.15e-48bHLH family protein