PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011088680.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 300aa    MW: 34729.7 Da    PI: 7.8287
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011088680.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM147.28.3e-46251513128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                     pGfrFhPt+eel+++yLk  v gkkl+  ++i  ++iy+++P++Lp  +k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s   
  XP_011088680.1  25 PGFRFHPTEEELLNFYLKSMVFGKKLRG-DIIGFLNIYNHDPRELPGLAKIGEREWYFFVPRDRKHGSGGRPNRTTEHGFWKATGSDRQIRSIsd 118
                     9*************************99.99***************8888899*************************************98766 PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++  glkktLvfy+grap+g+ktdWvm+eyrl
  XP_011088680.1 119 PKKMLGLKKTLVFYQGRAPRGTKTDWVMNEYRL 151
                     7788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-5423169IPR003441NAC domain
PROSITE profilePS5100553.03123169IPR003441NAC domain
PfamPF023651.1E-2425151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MEIYVCVFAV AVSSMDESRC EVELPGFRFH PTEEELLNFY LKSMVFGKKL RGDIIGFLNI  60
YNHDPRELPG LAKIGEREWY FFVPRDRKHG SGGRPNRTTE HGFWKATGSD RQIRSISDPK  120
KMLGLKKTLV FYQGRAPRGT KTDWVMNEYR LPDKYSPPKD IVLCKIYRKA TSLKELEQRA  180
AMEEEIQSFR AYTSPPPLTP SIDATSVCNQ FEELNPTITE SNSMGLKKEN EGLMLVHEKY  240
GDTFQESSKV RTCSSLMMPN GRHNLAELQL PKLNMDWTQD SFWTQFSPWL DNFTPFFSMC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-43171696168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011088680.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088680.10.0NAC domain-containing protein 35
SwissprotQ10S658e-97NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A2G9I7J91e-160A0A2G9I7J9_9LAMI; Uncharacterized protein
STRINGMigut.B00028.1.p1e-148(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35312248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-104NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]