PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011089073.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 217aa    MW: 24908.8 Da    PI: 9.2355
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011089073.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.64.6e-1199142151
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +  +GV+++    +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_011089073.1  99 CVMRGVYFKN--LKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 142
                     568****966..5********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.2E-599143IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-8100145IPR016177DNA-binding domain
SMARTSM003802.3E-4102157IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.8E-6103147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MMRTRNSHGR SSFLAPLSCA FEHGHTPENC AESTKSVSVH PLPLNDNYKP NEETTSETGP  60
GSSNLSASSP PKEHLIQQFP EIKRRKRHRR KQVENQEQCV MRGVYFKNLK WQAAIKVDKK  120
QIHLGTVGSQ EEAARLYDRA AFMCGREPNF ELSEEEKQEL RKFKWDEFLA MTRSAITNKK  180
SQRRSGTVPR RKFEENEWEG EQGRNGFSAS EDDALAP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011089073.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089073.11e-163ethylene-responsive transcription factor-like protein At4g13040 isoform X3
TrEMBLA0A4D8ZWT01e-101A0A4D8ZWT0_SALSN; Uncharacterized protein
STRINGEOX938576e-83(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.14e-46ERF family protein