PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011089199.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 216aa    MW: 23789.6 Da    PI: 6.1665
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011089199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.91.4e-094994156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    + ykGVr +k      +e+r+p   +k+ r++lg+f  +e Aa a++ a+++l+ge
  XP_011089199.1 49 PVYKGVR-RK------SEVREP---NKKSRIWLGTFPDPETAAIAHDVAALALRGE 94
                    5799998.44......367777...347**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.44838101IPR001471AP2/ERF domain
PfamPF008473.2E-44994IPR001471AP2/ERF domain
SMARTSM003803.9E-1750107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.8E-2050103IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-1350103IPR016177DNA-binding domain
CDDcd000184.09E-2151103No hitNo description
PRINTSPR003671.3E-65162IPR001471AP2/ERF domain
PRINTSPR003671.3E-683103IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MHMDFGDDVV QSSTSSSSQQ PENVLSPTTP PFKHKKRAGR KIFKETRHPV YKGVRRKSEV  60
REPNKKSRIW LGTFPDPETA AIAHDVAALA LRGENAPLNF PDSARLLPRA PSSSHQDIQR  120
AALEAAMSSG GKPLLGTHRQ AFDQTRTVSV ENGTERASEG NESGRVGFVD EEAMFNMPVL  180
LDSLAEGLLL TPLAMSEGFS WSRDEVDDDV ELHLWA
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011089199.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089199.11e-159dehydration-responsive element-binding protein 1D-like
TrEMBLA0A2G9I6L39e-72A0A2G9I6L3_9LAMI; Uncharacterized protein
STRINGXP_010243826.11e-58(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.13e-37C-repeat-binding factor 4