PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011089362.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Dof
Protein Properties Length: 319aa    MW: 34313.9 Da    PI: 7.472
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011089362.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.32.3e-403898363
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    ++alkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  XP_011089362.1 38 QQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 98
                    7899*****************************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074786.0E-292595IPR003851Zinc finger, Dof-type
PfamPF027015.7E-343995IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.6464195IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104379IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005730Cellular Componentnucleolus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MDSSSAQHHH QEMGSQTLES MLVCTKTQQE KKPRPADQQA LKCPRCDSTN TKFCYYNNYS  60
LSQPRYFCKS CRRYWTKGGT LRNVPVGGGC RKNKRSSSSS SSSSLSSSKR GQDPPITTLP  120
SPMDPNSLTP PLSYDSNDLS LAIARIQKQS SGQLLGLDDH QEFSIWGNPN MPHHHGDVLG  180
SNSGLASSSS GLFDALRSGF LESTPPANGF QNLYYGGMGN GNLQGVENGG MGMSGSQEMG  240
VPFEEFNGGT TASSTAVTTV KQEMCGSGRE GESRVLWGFP WQNLGGGDGN TTMDLDSGRL  300
SWNGIGSSNW HGLLNSPLM
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011089362.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089362.10.0dof zinc finger protein DOF2.1
TrEMBLA0A2G9GN631e-125A0A2G9GN63_9LAMI; Uncharacterized protein
STRINGVIT_06s0004g03420.t011e-108(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.11e-38TARGET OF MONOPTEROS 6