PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011089574.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

MYB_related

Protein Properties

Length: 255aa MW: 27396.6 Da PI: 9.1288

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011089574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.7	4.7e-07	62	106	3	44
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrw 44 WT+eE+ +l d+ ++G++ + ++Ia+ + +t ++ +r XP_011089574.1 62 DWTPEEQSILEDLLVKYGSEsvivRYAKIAQALR-DKTVRDVALRC 106 6*********************************.99999998885 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	8.58E-7	56	116	IPR009057	Homeodomain-like
SMART	SM00717	0.0019	59	112	IPR001005	SANT/Myb domain
Pfam	PF00249	5.5E-6	62	106	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	1.0E-4	63	114	IPR009057	Homeodomain-like
CDD	cd00167	1.78E-6	63	107	No hit	No description
Pfam	PF12579	6.2E-17	196	229	IPR022228	Protein of unknown function DUF3755

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence Send to blast
MAASANPSSG AHSNASNGNN NSGNSKGGGQ ENANGGGLSA TENSVVGPTQ AALRHNPGLS 60 VDWTPEEQSI LEDLLVKYGS ESVIVRYAKI AQALRDKTVR DVALRCRWMS KKENGKRRKD 120 DSSSSRKSKD KKEKVTDSLP KSSQVANRSN GPAYVQSMMS MESDDGISYK DIGGAAGQLL 180 EQSAHALDQI SANFSACKIH DNINLFCQAR TNILSILNDL NDTPEIMKQM PPLPVKLNEE 240 LANSILPRTS LPKKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	132	RKSKDKKE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011089574.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011089574.1	0.0	uncharacterized protein LOC105170494 isoform X2
TrEMBL	A0A2G9HQI7	1e-140	A0A2G9HQI7_9LAMI; Uncharacterized protein
STRING	Migut.N00689.1.p	1e-138	(Erythranthe guttata)