PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011089901.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family B3
Protein Properties Length: 205aa    MW: 24096.2 Da    PI: 3.988
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011089901.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.43e-1418921490
                    T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
                    + + +p  f+ +++      +  +l+d+ g+ We+ +  + ++++y+ ++ W +F+++n L+ gDfvvF ++g++ f
  XP_011089901.1 18 QEMQIPPAFVPKIQRA--LAQGFVLRDRYGNLWEMGVATSSGDKWYFRKEDWPQFCEENSLEMGDFVVFNYKGNNLF 92
                    56889*****999755..44459**************88888888**************************997655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.26E-167102IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.107.4E-179102IPR015300DNA-binding pseudobarrel domain
CDDcd100172.47E-12997No hitNo description
SMARTSM010191.1E-810100IPR003340B3 DNA binding domain
PfamPF023625.0E-121891IPR003340B3 DNA binding domain
PROSITE profilePS5086312.18220100IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MDSGTGCYSF FKIILTCQEM QIPPAFVPKI QRALAQGFVL RDRYGNLWEM GVATSSGDKW  60
YFRKEDWPQF CEENSLEMGD FVVFNYKGNN LFDFLLFGND ACEKKGVGAL KFRVKEEEVD  120
DNQEHDEHDD EYVQEEESGE HDDDDDDYVE EEESGEHDDD DDDYVEEEEE DERVTSISKK  180
VKSKLQVKIL LCTGEEHERR PYIWY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011089901.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089901.11e-150putative B3 domain-containing protein At5g66980
TrEMBLA0A2G9IAD46e-29A0A2G9IAD4_9LAMI; Uncharacterized protein
STRINGMigut.N02605.1.p9e-26(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10912264
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.15e-16B3 family protein