PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011090096.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 309aa    MW: 35736.1 Da    PI: 5.9962
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011090096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM129.72.2e-40321581128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp+G+rF+Ptd el+ +yLk+kv++++l++ + i++vd+y++ P+dL  ++  +e+e y F++r++++++g+r+nr+t  gyWkat  d+++ + 
  XP_011090096.1  32 LPVGYRFQPTDTELILHYLKRKVNNQPLPC-TLIHTVDVYEFRPEDLCDML--GENERYLFCPRKRRSSSGTRANRTTPYGYWKATIGDRAIRH- 122
                     799***************************.89**************7444..789**************************************. PP

             NAM  96 kgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                     +g++v  +ktLv+y   + ++ +++ktdW+mheyrl
  XP_011090096.1 123 NGKEVAYRKTLVYYmngESSNTTSRKTDWIMHEYRL 158
                     9999**********75545667778*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.07E-4825178IPR003441NAC domain
PROSITE profilePS5100544.94732180IPR003441NAC domain
PfamPF023653.0E-2333158IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MSCMSSSALN MMGNMNAVVQ EEYPALSIMN CLPVGYRFQP TDTELILHYL KRKVNNQPLP  60
CTLIHTVDVY EFRPEDLCDM LGENERYLFC PRKRRSSSGT RANRTTPYGY WKATIGDRAI  120
RHNGKEVAYR KTLVYYMNGE SSNTTSRKTD WIMHEYRLKN HSDAPDRLWD DIVLCRIHNH  180
KSKKYRSNHE DGATNESDQW NQPNPIQAIE DEDVDVNHQQ QQQTLSASFE DSCHSTKQGC  240
SDQCKSSSND LFDGFNELMD KGMEFLDEVM SMDFLISQKV YVYIGQKDCI FSIEIGVLQS  300
TCRAFLSFN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-353218315171Stress-induced transcription factor NAC1
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011090096.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0437382e-56KJ043738.1 Sesamum indicum clone TilSSR_14939 microsatellite Sesame_14939 sequence.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.15e-40NAC domain containing protein 32