PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011090107.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family GeBP
Protein Properties Length: 171aa    MW: 19672.3 Da    PI: 10.1555
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011090107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57340.76.5e-1341854897
          DUF573 48 kvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97
                    ++s+ q+ +KirrLK+K++k+ +      + s++++hd++++el++kiWg
  XP_011090107.1 41 DFSEAQIRDKIRRLKQKYHKQARS-----KSSIKTPHDREAYELARKIWG 85
                    799****************99998.....789*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.7E-114185IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MNRRSASKVP SKPTRLFTQK DEIDLLNSLL NSSGNPICGG DFSEAQIRDK IRRLKQKYHK  60
QARSKSSIKT PHDREAYELA RKIWGPKKTR IPSPTTLDDA KKEGSESRVN WSSYPFLMRQ  120
VSWAFSGSYE VYKQGLEGLG EDVLKGFDEK WMELEKEEAA LEARRAQLLH N
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011090107.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090107.11e-125probable transcription factor At1g11510
TrEMBLA0A2G9G0U96e-58A0A2G9G0U9_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1363478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.11e-07DNA-binding storekeeper protein-related transcriptional regulator