PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011090207.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bZIP
Protein Properties Length: 228aa    MW: 25921.2 Da    PI: 10.1189
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011090207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.47.4e-14161204548
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                     +r rrk+kNRe+A rsR+RK+a+  eL +kv  Le+eN +Lkke
  XP_011090207.1 161 RRLRRKIKNRESAARSRARKQAYHNELVTKVSRLEEENAKLKKE 204
                     6889**************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.1E-13156205No hitNo description
SMARTSM003385.6E-12157224IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.047159204IPR004827Basic-leucine zipper domain
PfamPF001707.8E-12161205IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-10161207No hitNo description
CDDcd147078.79E-15161199No hitNo description
PROSITE patternPS000360164179IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MGIQTMNSHL GGGWHQSHVQ HPPARHNSWL GLTLEEVENH LVSLQRQASW SLARAFSGKT  60
VDEVWGDIQR GYKMRNAGKT NSQEREPTLG ETTLEDFLVK AGMYVNSASI EPMMSLDSAL  120
KSQKFSSQMG LSPSPSTDAL SDTPTPGRKR ISGDLEKTLE RRLRRKIKNR ESAARSRARK  180
QAYHNELVTK VSRLEEENAK LKKEKEFEEM LSCEFSEPKY QLRRTSSF
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter and to the ABRE of the Em1 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011090207.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011090207.11e-170ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X4
SwissprotQ9C5Q24e-44AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3
TrEMBLA0A2G9GW381e-130A0A2G9GW38_9LAMI; Uncharacterized protein
STRINGMigut.N02398.1.p4e-96(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-31bZIP family protein
Publications ? help Back to Top
  1. Haas BJ, et al.
    Full-length messenger RNA sequences greatly improve genome annotation.
    Genome Biol., 2002. 3(6): p. RESEARCH0029
    [PMID:12093376]
  2. Sakuraba Y,Han SH,Lee SH,Hörtensteiner S,Paek NC
    Arabidopsis NAC016 promotes chlorophyll breakdown by directly upregulating STAYGREEN1 transcription.
    Plant Cell Rep., 2016. 35(1): p. 155-66
    [PMID:26441053]
  3. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]