PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011091501.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 174aa    MW: 19010.9 Da    PI: 10.0365
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011091501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.00114668123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ F++   L  H  +H
  XP_011091501.1 46 FTCKTCNRQFPSFQALGGHRASH 68
                    89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.15E-844114No hitNo description
PfamPF139122.1E-124570IPR007087Zinc finger, C2H2
SMARTSM003550.134668IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.664673IPR007087Zinc finger, C2H2
PROSITE patternPS0002804868IPR007087Zinc finger, C2H2
PfamPF139121.0E-1091116IPR007087Zinc finger, C2H2
SMARTSM003550.2792114IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.66392114IPR007087Zinc finger, C2H2
PROSITE patternPS00028094114IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0071289Biological Processcellular response to nickel ion
GO:2000280Biological Processregulation of root development
GO:0005634Cellular Componentnucleus
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MTMMKRTRDD QVRDDNITAL ANCLMLLSSR SGRGAGGGGE FSTRVFTCKT CNRQFPSFQA  60
LGGHRASHKK PRLMAGDESL QRPLSPPKPK THECSICGLE FPIGQALGGH MRRHRAGAVA  120
DDQNLRAAPA VSEAPIVKRA NSRRVLCMDL NLTPLENKFV FGDGIINPAV DCFF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011091501.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091501.11e-127zinc finger protein ZAT12-like
TrEMBLA0A2G9HTK21e-61A0A2G9HTK2_9LAMI; Uncharacterized protein
STRINGXP_009757271.16e-61(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.12e-39C2H2 family protein