PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011091560.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 168aa    MW: 18800.7 Da    PI: 10.2666
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011091560.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.63e-0558921554
                    HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    ++ ++++ L++l+ +      +K + a++L +A+eYI+ L
  XP_011091560.1 58 KVSERISALQQLVSPY-----GKTDTASVLLEAMEYINFL 92
                    78899********999.....9***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.0454392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-843101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-1150106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00555198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.05E-45197No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MHRDIQRQRR GVKSGEIKKK MMQHKRSPIS IDQSSFMSLM PKRLKTDVTL SSKEKKEKVS  60
ERISALQQLV SPYGKTDTAS VLLEAMEYIN FLHEQVKVLS APYLYNTPVQ AQGEEPCSLK  120
SKGLCLVPIS FTVGVVSSNG ADIWAPIKTS HLNSRRSISD EVSVVTHS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011091560.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091560.11e-122transcription factor bHLH113 isoform X1
SwissprotQ7XJU23e-52BH153_ARATH; Transcription factor bHLH153
TrEMBLA0A2G9GDK71e-84A0A2G9GDK7_9LAMI; Uncharacterized protein
STRINGMigut.N03067.1.p1e-77(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10428811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.54e-47bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]