PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011091611.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Nin-like

Protein Properties

Length: 688aa MW: 77043.9 Da PI: 7.663

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011091611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.6	6.1e-29	583	633	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+ sl++l++yFs+++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rki+++ XP_011091611.1 583 EKHFSLSVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGISRWPSRKINKV 633 7999*********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.779	572	653	IPR003035	RWP-RK domain
Pfam	PF02042	9.0E-27	587	633	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence Send to blast
MDGMVVTSME ESLRGSNLGD ALSNVVELMN YESCDGWHNS PGDLSNQMFP CLAMPSASPT 60 NSGPLDRLIF MEQYISRNFV KDSDVTGGLL PGGDRMMFQQ MERQFPFLMD STDDTIEVME 120 MGDISSRKLN ATANIGNGVI PRPLRPSLNE KMLRALHLFK EWSGGGILAQ VWAPMKNGGN 180 YILTTCEQPC LHDQKLSGYR EVSRLFTFAA EPSPGSFPGL PGRVFTSKIP EWTSNVIYYN 240 KAEYLRIQYA IDHEVRGSIA LPVFEDDSLD RSCCAVLELV TTKEKPNFDL EMEHICRALQ 300 AVDLSSTQPP RLPSQSLSKN HKAALAEITA VLRAICHAHR LPLAQTWIPC SYKADSGCET 360 VRVRGQNTSP SEKYVLFIEE TACYWGDTNM YGFVHACSKH YLEEGQGVVG KSFQSNQPFF 420 YPDVKEYHIT EYPLVHHARR FGLNAAVAIR LRSTYTGDDD YILEFFLPVN MKGRIEQQLL 480 LNNLSNTMQK LCTSLRKVSD AELLGTNNCK VRLPDGATKD GSTFASFMKS SEPSLIIDNL 540 KSVGRAPEHI SVSKTKEIKD DGPPEQTMVR LKRQVEKKRS TSEKHFSLSV LQQYFSGSLK 600 DAAKSLGVCP TTLKRICRQH GISRWPSRKI NKVHRSLKKI QSVLESVHGV ERGLKFDPNT 660 GGLITAGSYL QEFDTSKSFL LTNTDWLH

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence Send to blast

MDGMVVTSME ESLRGSNLGD ALSNVVELMN YESCDGWHNS PGDLSNQMFP CLAMPSASPT  60
NSGPLDRLIF MEQYISRNFV KDSDVTGGLL PGGDRMMFQQ MERQFPFLMD STDDTIEVME  120
MGDISSRKLN ATANIGNGVI PRPLRPSLNE KMLRALHLFK EWSGGGILAQ VWAPMKNGGN  180
YILTTCEQPC LHDQKLSGYR EVSRLFTFAA EPSPGSFPGL PGRVFTSKIP EWTSNVIYYN  240
KAEYLRIQYA IDHEVRGSIA LPVFEDDSLD RSCCAVLELV TTKEKPNFDL EMEHICRALQ  300
AVDLSSTQPP RLPSQSLSKN HKAALAEITA VLRAICHAHR LPLAQTWIPC SYKADSGCET  360
VRVRGQNTSP SEKYVLFIEE TACYWGDTNM YGFVHACSKH YLEEGQGVVG KSFQSNQPFF  420
YPDVKEYHIT EYPLVHHARR FGLNAAVAIR LRSTYTGDDD YILEFFLPVN MKGRIEQQLL  480
LNNLSNTMQK LCTSLRKVSD AELLGTNNCK VRLPDGATKD GSTFASFMKS SEPSLIIDNL  540
KSVGRAPEHI SVSKTKEIKD DGPPEQTMVR LKRQVEKKRS TSEKHFSLSV LQQYFSGSLK  600
DAAKSLGVCP TTLKRICRQH GISRWPSRKI NKVHRSLKKI QSVLESVHGV ERGLKFDPNT  660
GGLITAGSYL QEFDTSKSFL LTNTDWLH

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011091611.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011091611.1	0.0	protein NLP9 isoform X2
Swissprot	Q9M1B0	0.0	NLP9_ARATH; Protein NLP9
TrEMBL	A0A2G9GDZ0	0.0	A0A2G9GDZ0_9LAMI; Uncharacterized protein
STRING	Migut.N03106.1.p	0.0	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	0.0	Nin-like family protein