PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011092943.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

NAC

Protein Properties

Length: 256aa MW: 29231.5 Da PI: 8.6886

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011092943.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	147.1	9.2e-46	11	137	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yLk v gkkl+ ++i ++iy+++P+dLp +k +e+ewyfF++rd+k+ +g r++r+tk+g+Wkatg+d++vls XP_011092943.1 11 PGFRFHPTEEELLNFYLKSMVLGKKLRG-DIIGFLNIYNHDPKDLPGLAKIGEREWYFFVPRDRKHGSGGRPSRTTKNGFWKATGSDRKVLSMsd 104 9***********************99.99***********8888899*********************************99865 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ glkktLvfy+grap+g++tdW+m+eyrl XP_011092943.1 105 LKKMLGLKKTLVFYEGRAPRGRRTDWIMNEYRL 137 56779************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	53.049	9	156	IPR003441	NAC domain
SuperFamily	SSF101941	9.29E-54	10	156	IPR003441	NAC domain
Pfam	PF02365	1.0E-24	11	137	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence Send to blast
MDEPHDQLDL PGFRFHPTEE ELLNFYLKSM VLGKKLRGDI IGFLNIYNHD PKDLPGLAKI 60 GEREWYFFVP RDRKHGSGGR PSRTTKNGFW KATGSDRKVL SMSDLKKMLG LKKTLVFYEG 120 RAPRGRRTDW IMNEYRLPDS CSPPSKDIVL CKIYRKATSL KVLEQRAAME EEVKTYSSPS 180 PLTSSLHPVS SSDQFEDVNS TSSNRRISTC TGLVLPNGIE NLAELQVPKI GIDWNQDCLW 240 TLENLTPYLP MCQFSL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	5e-44	11	156	17	168	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011092943.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011092943.1	0.0	NAC domain-containing protein 35-like
Swissprot	Q10S65	8e-85	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A2G9I7J9	1e-130	A0A2G9I7J9_9LAMI; Uncharacterized protein
STRING	Migut.B00028.1.p	1e-119	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3531	22	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	8e-96	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]