PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011092990.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 332aa    MW: 36696.7 Da    PI: 6.7868
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011092990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.2e-30163221259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+++ gC+++k+ver+++dp ++++tY+ eHnh+
  XP_011092990.1 163 SDMWSWRKYGQKPIKGSPYPRGYYRCSTSkGCMARKQVERNRSDPGMFIVTYTAEHNHP 221
                     79************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-31151223IPR003657WRKY domain
PROSITE profilePS5081135.163157223IPR003657WRKY domain
SuperFamilySSF1182905.75E-27157223IPR003657WRKY domain
SMARTSM007744.6E-37162222IPR003657WRKY domain
PfamPF031064.7E-26164221IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010150Biological Processleaf senescence
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MEDDWDLHAV VRGCTAITTA SSSSSAAVVP ASVFSSFQQD SQFCGQDLFE PRRESLVQEL  60
HDLYKPFFPK SQDSLQTVVS PPISRHSVLQ DLPAAEQQQR QQQQQIILKQ SPQQSHLRHK  120
QQLFSVSNAP KSTTASHNPS PRSKRRKNHM KRVCHVAAEN ISSDMWSWRK YGQKPIKGSP  180
YPRGYYRCST SKGCMARKQV ERNRSDPGMF IVTYTAEHNH PMPTHRNSLA GSTRQKPAEA  240
PSKPTCSSEL SPAASLSPVP EKLESSPEQL AEAEEEDDDF SVSNMALDDD FFAGLEDFTG  300
PEDGGECMSG HFAANVQLSW LSNSATTIAG GG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-21150224580Disease resistance protein RRS1
5w3x_D2e-21150224580Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00422DAPTransfer from AT4G01250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011092990.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011092990.10.0WRKY transcription factor 22
TrEMBLA0A142CCY41e-143A0A142CCY4_9LAMI; WRKY transcription factor
STRINGMigut.B01797.1.p1e-115(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25912457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-75WRKY family protein