PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011093230.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Trihelix
Protein Properties Length: 341aa    MW: 37845.6 Da    PI: 9.9835
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011093230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix64.32.7e-2043133186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqle 86 
                     +W+ +e+ aLi+a+r+++ +lrrg+l++++W+ev++ +         ++++qC++k+e+l+kry+++ +++  +    + +st+++f++++
  XP_011093230.1  43 CWSPDETVALIDAYRDKWYSLRRGNLRANHWQEVADDVasrCPASPPKTAVQCRHKMEKLRKRYRAEIQRAAAHggVRRFTSTWVHFQRMH 133
                     7*************************************5432234489*******************99998885569999*********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.4E-2242135No hitNo description
PROSITE profilePS500906.20244103IPR017877Myb-like domain
SMARTSM005957.5E-1351140IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MATILSPSSN SPHDHDDDHI PTATLALPSI ATASASRRLP PPCWSPDETV ALIDAYRDKW  60
YSLRRGNLRA NHWQEVADDV ASRCPASPPK TAVQCRHKME KLRKRYRAEI QRAAAHGGVR  120
RFTSTWVHFQ RMHSMEKGPN PSPPSSDDEE EDDHKNSIKR INDLYNYNNQ KGNFGSQGLE  180
SNGATSAFRI KIPGRATTGP SGAKVYSKFD EMGGQNPNYP NPRFANSVAG VNGAASSKVL  240
RDAFVGRGEI GKRVGEISKK NKGDGVGEVV AAIQALGEGF MRVEKVKMDM VRQVEEMRME  300
MELKRTEMIL ESQQRIVEAF AKAISERSAK RVKRNSTPPD C
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011093230.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011093230.10.0trihelix transcription factor ASIL2
TrEMBLA0A2G9HZ490.0A0A2G9HZ49_9LAMI; Transcription factor GT-2
STRINGMigut.N01727.1.p1e-173(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80282327
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.15e-65Trihelix family protein