PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011094753.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 452aa    MW: 49380.1 Da    PI: 9.3272
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011094753.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.73.6e-31187243360
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     Dg++WrKYGqK+vkgse+prsYY+Ct+++Cpvkkkve++  d+++ ei+Y+geHnh+k
  XP_011094753.1 187 DGHSWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVEKKL-DGQIAEIVYKGEHNHPK 243
                     9***************************************.***************85 PP
2WRKY101.84e-32376433259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+vkg+++prsYYrCts++C+v+k ver++edp ++++tYeg+Hnh+
  XP_011094753.1 376 GDGFRWRKYGQKVVKGNPYPRSYYRCTSPKCNVRKYVERTSEDPGTFITTYEGRHNHS 433
                     6********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-28183244IPR003657WRKY domain
SuperFamilySSF1182901.7E-24184244IPR003657WRKY domain
SMARTSM007746.1E-35185243IPR003657WRKY domain
PfamPF031061.1E-24187242IPR003657WRKY domain
PROSITE profilePS5081122.791187244IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-33361435IPR003657WRKY domain
SuperFamilySSF1182901.57E-28369435IPR003657WRKY domain
PROSITE profilePS5081133.488370435IPR003657WRKY domain
SMARTSM007744.4E-37375434IPR003657WRKY domain
PfamPF031063.5E-25377432IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MTGIKETEKI VIVKPVACRP GFSNLKSFSE LLADAVNASP PAAFSETAVA VIKPRTVRFK  60
PVCRRDLVGA EVFGSAACNK SEKVPESKLT STVVYKPIAK LVSKRTVSLL ANLGGQGISS  120
STENAEAGAP IQSPNQVKRQ TDPTSDLYQT FALHSEQNAN AIRENSEDGN KSMSLPVPNN  180
GDRPSYDGHS WRKYGQKQVK GSEYPRSYYK CTHPNCPVKK KVEKKLDGQI AEIVYKGEHN  240
HPKPQPLNHN PLDGDAQEPA NTATQNEQAE RIKGQLKSEN DIESSAQSTF SGAAPPINDL  300
VTAATCNASF STSNNSLGLS GECQEVSEPL EAEEGHDFGR KRTKRGNQLS KASKVGEPSS  360
EPQIVVQNNT DSDIVGDGFR WRKYGQKVVK GNPYPRSYYR CTSPKCNVRK YVERTSEDPG  420
TFITTYEGRH NHSMPIKHTN AEASKASTKN KP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-30187435877Probable WRKY transcription factor 4
2lex_A3e-30187435877Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011094753.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094753.10.0WRKY transcription factor 44-like
RefseqXP_011094754.10.0WRKY transcription factor 44-like
RefseqXP_020553423.10.0WRKY transcription factor 44-like
RefseqXP_020553424.10.0WRKY transcription factor 44-like
TrEMBLA0A2G9H7140.0A0A2G9H714_9LAMI; Uncharacterized protein
STRINGVIT_08s0040g03070.t011e-163(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99512227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.17e-86WRKY family protein