PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095208.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 174aa    MW: 19340.5 Da    PI: 4.9618
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.16.7e-052850123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ Fs+   L  H++ H
  XP_011095208.1 28 YRCSFCKRGFSNAQALGGHMNIH 50
                    9********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576677.28E-72554No hitNo description
Gene3DG3DSA:3.30.160.606.7E-52763IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.00532850IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.4682855IPR007087Zinc finger, C2H2
PROSITE patternPS0002803050IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051973Biological Processpositive regulation of telomerase activity
GO:0003676Molecular Functionnucleic acid binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MDIDPPGLET SSDQMIIWSD DLVQTRSYRC SFCKRGFSNA QALGGHMNIH RKDRAKLKEF  60
SCENLLSLDI TKNTTDSEDS PPPDSSSSDK LSLKKHFSDG KTEEGNRDLV PPGTEKLIHR  120
LPLFAEAPSL NSGDHEEEAA ATLLDKRVDN IRVVGELDLE LRLGPEPHDA KSKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011095208.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095208.11e-125transcriptional regulator TAC1
TrEMBLA0A2G9HHV46e-59A0A2G9HHV4_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74631626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.14e-17C2H2 family protein