PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095229.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 1144aa    MW: 125556 Da    PI: 7.6661
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.15.7e-31823880260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     dDgynWrKYGqK+vkgs +prsYY+Ct+++Cp+kkkve++  d++++ei+Y+g Hnh+k
  XP_011095229.1 823 DDGYNWRKYGQKQVKGSANPRSYYKCTFPNCPTKKKVEQNL-DGHITEIVYKGCHNHPK 880
                     8****************************************.***************85 PP
2WRKY100.31.1e-319831041159
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY    1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59  
                      ldDgy+WrKYGqK+vkg+++prsYY+Cts+gC+v+k+ver+ +d ++v++tYeg+Hnh+
  XP_011095229.1  983 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSNGCSVRKHVERACHDSRAVITTYEGKHNHD 1041
                      59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.80.10.102.9E-4012290IPR032675Leucine-rich repeat domain, L domain-like
SuperFamilySSF520471.18E-3266290No hitNo description
SMARTSM00367647499IPR006553Leucine-rich repeat, cysteine-containing subtype
SMARTSM0036751101126IPR006553Leucine-rich repeat, cysteine-containing subtype
SMARTSM003670.28152177IPR006553Leucine-rich repeat, cysteine-containing subtype
SMARTSM003672.1178203IPR006553Leucine-rich repeat, cysteine-containing subtype
SMARTSM00367270228253IPR006553Leucine-rich repeat, cysteine-containing subtype
SMARTSM003670.0025254279IPR006553Leucine-rich repeat, cysteine-containing subtype
SuperFamilySSF520473.66E-43254501No hitNo description
PfamPF135161.4254276IPR001611Leucine-rich repeat
Gene3DG3DSA:3.80.10.108.2E-46298517IPR032675Leucine-rich repeat domain, L domain-like
SMARTSM00367240305329IPR006553Leucine-rich repeat, cysteine-containing subtype
SMARTSM003670.095330355IPR006553Leucine-rich repeat, cysteine-containing subtype
PfamPF135160.16331352IPR001611Leucine-rich repeat
SMARTSM003670.62356381IPR006553Leucine-rich repeat, cysteine-containing subtype
SMARTSM003678.7382407IPR006553Leucine-rich repeat, cysteine-containing subtype
SMARTSM0036712408432IPR006553Leucine-rich repeat, cysteine-containing subtype
PfamPF135164.8E-5408430IPR001611Leucine-rich repeat
SMARTSM0036767433457IPR006553Leucine-rich repeat, cysteine-containing subtype
SuperFamilySSF520472.75E-22458619No hitNo description
SMARTSM003679.8E-5458483IPR006553Leucine-rich repeat, cysteine-containing subtype
SMARTSM003670.092484509IPR006553Leucine-rich repeat, cysteine-containing subtype
SMARTSM0036751510534IPR006553Leucine-rich repeat, cysteine-containing subtype
Gene3DG3DSA:3.80.10.102.1E-6518620IPR032675Leucine-rich repeat domain, L domain-like
SMARTSM003670.018535560IPR006553Leucine-rich repeat, cysteine-containing subtype
SMARTSM0036723561585IPR006553Leucine-rich repeat, cysteine-containing subtype
PfamPF135160.64561583IPR001611Leucine-rich repeat
Gene3DG3DSA:2.20.25.801.5E-26815881IPR003657WRKY domain
PROSITE profilePS5081122.641817881IPR003657WRKY domain
SuperFamilySSF1182901.44E-23817881IPR003657WRKY domain
SMARTSM007743.8E-33822880IPR003657WRKY domain
PfamPF031069.0E-24823879IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.0E-369681043IPR003657WRKY domain
SuperFamilySSF1182904.05E-289751043IPR003657WRKY domain
PROSITE profilePS5081138.2859781043IPR003657WRKY domain
SMARTSM007741.9E-369831042IPR003657WRKY domain
PfamPF031062.2E-249841041IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1144 aa     Download sequence    Send to blast
MKKQKLVPEP PNLSRFDLLC EEIVFIILDF LNENPLDKKA FALVCRSFYA IESRHRKFLK  60
PLRSEHLTKV LNRYPHVSTL DLSLCPRITD SSLGVISGSC KEMLRSINLS RSKFFSHVGL  120
SNLALNCRNL VEIDLSNATE LKDLAAAAIA EAKNLERLWL VRCKSITDIG IGCIAVGCRK  180
LRLLSLKWCL GIGDLGVGLI AVKCKDMRSL DLSYLPITNK CLSQILELQN LEDLVLEGCF  240
GIDDDSLTAH KLGCISLETL DMSSCQNVSH VGLSSLTSGA GSLRQLILSY GSRVDLALAD  300
SLQKLSMLQS IKLDGCQVTC SGLKAIGNWC VSLTELSLSK CLGVTDEGLS VLVTKHKDLK  360
KLDITCCRKI THVSLAHITN SCTSLVSLKM ESCTLISAEA FVLIGQRCQL LEELDLTDNE  420
IDDEGLKSIS RCSQLSSLKL GICLNITDQG LIHIGLCCSK LKELDLYRSA GITDSSILAI  480
ARGCSGIEMI NIAYCKFISD RSFMSLAKCP KLKTLESRGC PLITSLGLAA VAVGCKQLAK  540
LDIKKCHSID DAGMNPLAHF SQNLKQINLS YTSVTDVGLL SLASISCLQS MTVLHLEGLT  600
SSGLAAALLA CGGLTKVKLQ ASFKSSLPQL LFEHLEARGC TFQWREKIFQ AELDPKCWKL  660
QLHNSFPPAA ASASLPISPP LSPSSYLSFP SILLHSPLFS SSNVLQSPTT TGTFSELSSK  720
DMDKEDTTNY TDFSFLSQTR PSNSSTDSFT RQQEDGTFNS LNKQPDFSTL NSGLKSEPAP  780
LHSFPPELST VQTNVHGVSA PPPPSQMHYS QPPQYVKEQR KSDDGYNWRK YGQKQVKGSA  840
NPRSYYKCTF PNCPTKKKVE QNLDGHITEI VYKGCHNHPK PQSTRRSSSN LIQNQEYSNH  900
SNSLFENARK QGETTPENSS ASFGDDDFEQ GSSMSNSRED DESEPEAKRW KGENENEGVS  960
ASGSRTVREP RVVVQTTSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT SNGCSVRKHV  1020
ERACHDSRAV ITTYEGKHNH DVPAARGSGS YNMSRQPAMN TTLKPSAMSS NSNGMNFPNP  1080
TGMQTMQNQT PYSLQMLQNT DGLAFSGFGN SAGAYISQMQ QGQNSLATTK EEPGDDSFFD  1140
SFLD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-378231044878Probable WRKY transcription factor 4
2lex_A5e-378231044878Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011095229.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020553387.10.0F-box/LRR-repeat protein 3
SwissprotQ8RWU50.0FBL3_ARATH; F-box/LRR-repeat protein 3
TrEMBLA0A061EXQ10.0A0A061EXQ1_THECC; RNI-like superfamily protein
STRINGEOY070490.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-116WRKY DNA-binding protein 33
Publications ? help Back to Top
  1. Callis J,Vierstra RD
    Protein degradation in signaling.
    Curr. Opin. Plant Biol., 2000. 3(5): p. 381-6
    [PMID:11019805]
  2. Xiao W,Jang J
    F-box proteins in Arabidopsis.
    Trends Plant Sci., 2000. 5(11): p. 454-7
    [PMID:11077244]