PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095310.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family C2H2
Protein Properties Length: 433aa    MW: 47072.8 Da    PI: 9.599
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.3e-05200222223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C++Cg+ F  ++ L++H  + H
  XP_011095310.1 200 TCHKCGEQFVKWEALESHHLSkH 222
                     7*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280201222IPR007087Zinc finger, C2H2
SuperFamilySSF563995.9E-22224432No hitNo description
Gene3DG3DSA:3.90.228.108.3E-8226426IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MGEKKRDVPT VWFSLKKSLH CKSEPSDVHS PKTRKQLSAI LTRKTGRSGC SRSIANLKDV  60
IHGSKRHLER PPSCSPRSIG SSEFLNPIAH EVILSNSRCE LKITGFGGFH EGYNSSGGDS  120
GGGGGGGGGG STFVGTLRPG TPGPGGHPTM HYFNPSFRNS ATPPRKNASL LTEREGLGNG  180
VPTQKRASFE KDSNGSSGVT CHKCGEQFVK WEALESHHLS KHAVTELVEG DSSRKIVEII  240
CRSSWLKSEN HCVRIDRVLK VHNMQKTLAR FEDYRETVKI KASKLPKKHP RCLADGNELL  300
RFYGTTLACS LGINGSSSLC VSDKCCVCRI IRDGFSTKRE LKDGVGVFTT STSGRAFESI  360
AMCEDDASLR KALIVCRVIA GRVHRPLENI QEISGQTGFD SLAGKVGLYS NIEELYLLNP  420
KALLPCFVVI CKT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119130SGGGGGGGGGGS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011095310.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020554053.10.0uncharacterized protein LOC105174809
TrEMBLA0A2C9W6P30.0A0A2C9W6P3_MANES; Uncharacterized protein
STRINGXP_010267823.10.0(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22442235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-180C2H2 family protein