PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095709.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 169aa    MW: 18615.8 Da    PI: 8.0864
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.71.6e-142171155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +++kG+r++k +g+Wv+eIr+p   g + +r +lg++  +e Aa a++ a  +l+g
  XP_011095709.1 21 KKFKGIRRRK-WGKWVSEIRVP---G-TpQRLWLGSYAPPEAAAVAHDVAFYCLRG 71
                    59*****998.**********8...3.69************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.41E-222181No hitNo description
SMARTSM003803.9E-262287IPR001471AP2/ERF domain
PfamPF008475.6E-72271IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-232281IPR001471AP2/ERF domain
SuperFamilySSF541713.6E-162279IPR016177DNA-binding domain
PROSITE profilePS5103220.2442281IPR001471AP2/ERF domain
PRINTSPR003671.1E-62334IPR001471AP2/ERF domain
PRINTSPR003671.1E-64561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MSCSSDELAY ANCHSTAASH KKFKGIRRRK WGKWVSEIRV PGTPQRLWLG SYAPPEAAAV  60
AHDVAFYCLR GNSSPQNLNF PLVLPASARV GMSPRSVQKA SSDAGLAVDA RLLDSKNKSS  120
FIEEGKKVNH LEEEHNTWQR NGGNWGGETS GWPLTTDEEQ LSVSVEDYL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-111681872Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011095709.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095709.11e-124ethylene-responsive transcription factor ERF020
SwissprotQ9C9I82e-40ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A2G9G8N02e-70A0A2G9G8N0_9LAMI; Uncharacterized protein
STRINGMigut.C01360.1.p6e-62(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.11e-42ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]