PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095770.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 350aa    MW: 39569.3 Da    PI: 6.8745
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.6e-17126176256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f +ae+Aa a+++ + +l+ge
  XP_011095770.1 126 LYRGVRQRH-WGKWVAEIRLPRK---RTRLWLGTFESAEKAALAYDRQAFRLRGE 176
                     59******9.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.53E-33125185No hitNo description
Gene3DG3DSA:3.30.730.103.4E-31126184IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-22126184IPR016177DNA-binding domain
PROSITE profilePS5103222.748126183IPR001471AP2/ERF domain
SMARTSM003805.6E-37126189IPR001471AP2/ERF domain
PfamPF008476.6E-12127176IPR001471AP2/ERF domain
PRINTSPR003674.0E-10127138IPR001471AP2/ERF domain
PRINTSPR003674.0E-10149165IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MEAAKFSNIQ EQGNRSTEIR LSPERQLTMS IRPMKKIRCP GPGKNQNPPR SKLLFPFALD  60
DEPQIAMTPY FSRFQLLDSS SRHKNPNMIS FAHQPRQWQR DSTRNDLDRP KIGADHLQCL  120
EMTPKLYRGV RQRHWGKWVA EIRLPRKRTR LWLGTFESAE KAALAYDRQA FRLRGENARL  180
NFPHLFIPAK RPVDQTQLAP VSNTYVISPT RIFSGKALES HLENFPRTNS GQNGTETNWK  240
NLEKGSLPTC DETSIDECGG DATDTGFLLG EFGNLEMFGS EWGTNASASE TLDGFPDQSS  300
TWHNGANVDF MNLSDFTVPG STDELLSAID AQMLQECSTS NPSDTWNIEG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-20125183160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011095770.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGMigut.M00859.1.p2e-37(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G36060.13e-33ERF family protein