PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011095881.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family CO-like
Protein Properties Length: 382aa    MW: 42953.8 Da    PI: 5.1901
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011095881.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box18.25.2e-06335436
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36
                    + C+ ++e+    +C+++  +lC +C  ++H+ 
  XP_011095881.1  3 QLCDFCSEQISMVYCRSDAACLCLSCDRNIHSA 35
                    57*******99********************54 PP
2CCT65.71.4e-22325367143
             CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 
                     R+ a+lRYkeKrk+RkF+KkirY+sRKa+A+ R+RvKGrFvk 
  XP_011095881.1 325 RDGAVLRYKEKRKSRKFNKKIRYASRKARADVRKRVKGRFVKT 367
                     899**************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003361.8E-7147IPR000315B-box-type zinc finger
PROSITE profilePS501198.816147IPR000315B-box-type zinc finger
CDDcd000214.69E-4435No hitNo description
PROSITE profilePS501198.664390IPR000315B-box-type zinc finger
PfamPF062036.0E-17325367IPR010402CCT domain
PROSITE profilePS5101715.487325367IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MGQLCDFCSE QISMVYCRSD AACLCLSCDR NIHSANALSK RHLRTLVCEQ CHHQAAVVRC  60
MEENVSRCQN CNWSAHAAPS SAMEHKRETI NCYSGCPSAA EFSTIWPFFS VDLSSCNLEA  120
DSMSNEEEYE RRPQSQSLPI GYSTEDAALD TNASKLEQFN GSESFNPLNQ KACLSRIKHL  180
DSIDDTLYLD FGISDIDLDL ENYGAVFDEL DDPQQFFENG GIDSLFEHGT ECNVKSVKES  240
SSKSETMQQA CSKQVSADSI TSCKSDTHIC FTEPAQSTLS LSFLAPDHEC ETKDHLDCEG  300
FSMATIEEHP CNIPYPGNQF SSAIRDGAVL RYKEKRKSRK FNKKIRYASR KARADVRKRV  360
KGRFVKTGDP YDYDPLDLTR IH
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011095881.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011095879.10.0zinc finger protein CONSTANS-LIKE 10 isoform X1
TrEMBLA0A2G9G4381e-177A0A2G9G438_9LAMI; Uncharacterized protein
STRINGEOX935731e-115(Theobroma cacao)
STRINGMigut.M01461.1.p1e-116(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48250.12e-75B-box type zinc finger protein with CCT domain