PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011096311.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 181aa    MW: 19926.7 Da    PI: 9.5381
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011096311.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.6e-111260555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     + +E++RR+++++  ++L +l+P++  +p +  s  + Le A++YIk+Lq
  XP_011096311.1 12 RKTIEKNRRNQMKTLCSRLSSLVPHQ--TPREVASLPDQLEGATNYIKKLQ 60
                    6789*********************7..48888*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.658759IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.3E-12971IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-111173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-71360IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.59E-61564No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MDHNPNPSKA DRKTIEKNRR NQMKTLCSRL SSLVPHQTPR EVASLPDQLE GATNYIKKLQ  60
TNIEKMKQKK NCLVGLSSAT ANSSARSSCS NSGGLVLPNV DVRVVGSALE VALVTGLNSQ  120
FMFTQTLRLL HEEGAEVLNA SFSVLENSIF HTIHCQIGEP AQGYGAARIS ERLRKYVYDV  180
N
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011096311.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096311.11e-133transcription factor bHLH125
TrEMBLA0A2G9GGH26e-70A0A2G9GGH2_9LAMI; Uncharacterized protein
STRINGPOPTR_0011s05320.18e-70(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA51052131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-43bHLH family protein