PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011096323.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Dof

Protein Properties

Length: 291aa MW: 31650.5 Da PI: 10.2194

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011096323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.5	2.9e-38	49	107	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +kcprCds+ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+ XP_011096323.1 49 PPPQKCPRCDSSNTKFCYYNNYSLSQPRYFCKGCRRYWTQGGTLRNVPVGGGCRKTKRP 107 56789**************************************************9975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	29.059	52	106	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	9.6E-33	52	106	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-25	53	106	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	54	90	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence Send to blast
MQFMQSNMEQ RRNEEKLLKQ QQDQQQPPSR RLKPAEMQMA AAHNQHQPPP PQKCPRCDSS 60 NTKFCYYNNY SLSQPRYFCK GCRRYWTQGG TLRNVPVGGG CRKTKRPKPS IPSSSSSEIA 120 RTQSLSPALP SQNLTGMISG SALRALPSVI PSVGHSNFYT GGAFMSSLAS MQSLPAGINQ 180 GVALNLGGGG QYGVSMALLQ GINVLPTMKP QEPQQLLQND FFQPHQSLTI PPRPSLSSWT 240 QGFLSRGTAS SSTASPSFWM GTAADGGNQG SSSFNPNHWS SDNHPGFDPS Q

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011096323.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096324.2	0.0	dof zinc finger protein DOF3.1
TrEMBL	A0A2G9GQ55	3e-99	A0A2G9GQ55_9LAMI; Uncharacterized protein
STRING	Migut.M01126.1.p	1e-82	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	6e-33	TARGET OF MONOPTEROS 6