PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011096327.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Dof

Protein Properties

Length: 149aa MW: 16990.4 Da PI: 10.6543

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011096327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	7.9e-39	49	107	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +kcprCds+ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rk k+ XP_011096327.1 49 PPPQKCPRCDSSNTKFCYYNNYSLSQPRYFCKGCRRYWTQGGTLRNVPVGGGCRKTKRP 107 56789**************************************************9985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	2.7E-33	52	106	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.059	52	106	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	7.0E-25	53	106	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	54	90	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 149 aa Download sequence Send to blast
MQFMQSNMEQ RRNEEKLLKQ QQDQQQPPSR RLKPAEMQMA AAHNQHQPPP PQKCPRCDSS 60 NTKFCYYNNY SLSQPRYFCK GCRRYWTQGG TLRNVPVGGG CRKTKRPKPS IPSSSSSEIA 120 RTQSLSPALP SQNLTACSLY RPASIKGLR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011096327.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096324.2	5e-95	dof zinc finger protein DOF3.1
TrEMBL	A0A2G9GQ55	7e-45	A0A2G9GQ55_9LAMI; Uncharacterized protein
STRING	Migut.M01126.1.p	4e-42	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	5e-33	TARGET OF MONOPTEROS 6