PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011096344.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family ERF
Protein Properties Length: 233aa    MW: 25334.6 Da    PI: 10.9189
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011096344.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-201968255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a+++a+++++g
  XP_011096344.1 19 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDNAARQFRG 68
                    58*******.**********8...557************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.631976IPR001471AP2/ERF domain
CDDcd000185.26E-311976No hitNo description
SuperFamilySSF541712.16E-221976IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.2E-331976IPR001471AP2/ERF domain
SMARTSM003801.2E-401982IPR001471AP2/ERF domain
PfamPF008471.0E-131968IPR001471AP2/ERF domain
PRINTSPR003674.7E-112031IPR001471AP2/ERF domain
PRINTSPR003674.7E-114258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MAPRVRTTAA SAGGDNEMHF RGVRKRPWGR YAAEIRDPGK KSRVWLGTFD TAEEAARAYD  60
NAARQFRGPK AKTNFPPPDS DVKKAAADGL VNNRSPSQSS SVESSSRETF PPVAVAVAVP  120
DSTLLDLTLG RRRMRFPFQN NHNQRPAAAV AASSAGGLVR IMPMQNTMLH LRPESRQEII  180
ELMNKLRRVP AEFHGGSAAQ SESDSSSAVV DLPKSPLSKG INLDLNLPPP ENL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-211976260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A6e-211976563ATERF1
3gcc_A6e-211976563ATERF1
5wx9_A2e-2020761572Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00542DAPTransfer from AT5G44210Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011096344.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020553968.11e-169ethylene-responsive transcription factor 4-like
TrEMBLA0A2G9GMS71e-94A0A2G9GMS7_9LAMI; Uncharacterized protein
STRINGXP_009618542.16e-56(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.17e-27erf domain protein 9