PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011096433.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 245aa    MW: 26761.5 Da    PI: 7.9533
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011096433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.7e-1061108354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN  + +Lr ll +     s+K++Ka+ L +++  +k+L
  XP_011096433.1  61 KSHSEAERRRRERINAHLVTLRGLLAPI----SGKMDKATLLAEVISEVKQL 108
                     58************************96....6*************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.07558108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.76E-1361118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-861108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.4E-1261117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.6E-864114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MYSDKYLSGN LSGISENQGY GPMSVKQTLV LDDEKSELVK ASERMGKKIA VSESKTMAAL  60
KSHSEAERRR RERINAHLVT LRGLLAPISG KMDKATLLAE VISEVKQLKK TARRASEGLH  120
VPTDTNEVQV EKLEDKADDG SVLLRASLCC DYTPDLLSNV KQAINDLPWQ PLKCEISTLG  180
GRVKIVFLIT ASGEGNCGST AAEELHFSSI SAALSNILDK VSASAEYGGE IFFPQKRRRV  240
SYVDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16671ERRRRE
2235239KRRRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011096433.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096433.21e-180transcription factor bHLH30-like
TrEMBLA0A2G9H6A13e-95A0A2G9H6A1_9LAMI; Uncharacterized protein
STRINGMigut.H01448.1.p3e-89(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67302230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-28bHLH family protein