PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011096716.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 462aa    MW: 49635.5 Da    PI: 5.3152
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011096716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.77.6e-31231289259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  XP_011096716.1 231 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 289
                     699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081133.109225291IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.9E-31227291IPR003657WRKY domain
SuperFamilySSF1182903.14E-26228291IPR003657WRKY domain
SMARTSM007741.4E-37230290IPR003657WRKY domain
PfamPF031069.9E-26232289IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MCSQFLKRME NYQGDLTDII RASGGGSSIA GGNTAAEPAA APHSWQFPTS NPVNYSTDPP  60
EDFGDPFTHL RDPLLHDIDT PVSGFFHNSN IIKPSFEETG NTAGGFAKGS INLAHRIPDD  120
EMERPASNIF SRMLQIAPTT KLPVSPCDSP AVVAAASPRG LEGPPVLVPN STHTLISPNS  180
SSGCLVESPG LQISSPRNTG IKRRKSQAKK VVCIPAPAPA NSRPSGEVVP SDLWAWRKYG  240
QKPIKGSPYP RGYYRCSSSK GCSARKQVER SRTDPNMLVI TYTSEHNHPW PTQRNALAGS  300
TRAQPSKSST AAKSSPNSQA QKSTNPKEEM KEFSTEKTAA PSSSSLSAAV KEEMHQDLDH  360
NQVEMDDPEF DEGFPNSYKP TLPDSNHSED SFFADLEEIE ADSLDILFTQ GFSGDDGRDD  420
DKALDPFSFY DWATGNNTST STSTGGGGGG ATTSYGEAKR GE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-25205292280Disease resistance protein RRS1
5w3x_D1e-25205292280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011096716.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096716.10.0probable WRKY transcription factor 14
TrEMBLA0A2G9HJZ50.0A0A2G9HJZ5_9LAMI; Uncharacterized protein
STRINGXP_010036632.11e-160(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67012433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.12e-88WRKY DNA-binding protein 14