PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011096765.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Trihelix

Protein Properties

Length: 324aa MW: 36127.7 Da PI: 8.8475

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011096765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	53.4	6.9e-17	10	95	2	79
trihelix 2 WtkqevlaLiearr........emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 W qe+++Liea++ +++e+++rgk ++ +W++v +++++ g+ rs++qC++kw+nl +++kk++e e++ +++ ++ XP_011096765.1 10 WNLQETMVLIEAKKmddqrrmkRVGESSERGKPAELRWKWVEDYCWKNGCLRSQNQCNDKWDNLMRDFKKVREYERRVAERGGEEK 95 ************666655555555555689******************************************9866555444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.713	2	74	IPR017877	Myb-like domain
Pfam	PF13837	7.4E-11	9	101	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence Send to blast
MLRDYRKGNW NLQETMVLIE AKKMDDQRRM KRVGESSERG KPAELRWKWV EDYCWKNGCL 60 RSQNQCNDKW DNLMRDFKKV REYERRVAER GGEEKSYWRI DKNERKDNNL PSNMLPQIYE 120 ALVEVVERKG QREAAASGGA GSSRANVVPA TSIVEKSAAS HVLGHLSMPP PVQQYPIIQA 180 PAMLLPLPPP AQAPAEPPTI PSSQPLPAVD SETSEYSDSP AKRRKRGSGG GDGEGTSGGV 240 GTLEEVGSAI SKSASIIAEA IRSCEEREER RHREVVSLQQ RRLEIEESKA EMNRQGINGL 300 VDAINKLANS ILALAAHKDQ STSK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011096765.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011096762.1	0.0	trihelix transcription factor ASR3 isoform X1
TrEMBL	A0A2G9HYY0	1e-150	A0A2G9HYY0_9LAMI; Transcription factor GT-2
STRING	Gorai.009G150000.1	1e-126	(Gossypium raimondii)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	2e-57	Trihelix family protein