PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011097460.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Dof

Protein Properties

Length: 341aa MW: 37095.3 Da PI: 8.8313

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011097460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	1e-39	35	94	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk++ XP_011097460.1 35 DPPLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKMK 94 6679*****************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	4.0E-33	37	92	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	6.0E-26	38	92	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.432	38	92	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	40	76	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence Send to blast
MMSPDNKPAA TKPGGKDESQ SSNAARKAAS SRPQDPPLKC PRCDSPNTKF CYYNNYSLTQ 60 PRHFCKTCRR YWTKGGALRN VPIGGGCRKN KKMKSSPRLS CDSKDSSGSS DVGGLKFFQG 120 IAPAMDFQLG GAGISFPARL NTSPNTTGLY NQFSSFGEIS NTCGAISSTP CFNLDSSVIG 180 FNSTTFPNFK QGDQGNMNSP GFHQELGSMN IHSSLASSIE SLSSINQDLH WKLQQQRLSM 240 LFVGDHTQKT NTNLPISLDQ TLVQKPQPIL FQNLEISKPQ ESCRIGTTKE SGNLSTEWFF 300 DNSYASVAPT PATSSSNVNE NTSNWSGIQA WSDLSQYSSL P

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011097460.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011097460.1	0.0	dof zinc finger protein DOF5.7-like
TrEMBL	A0A2G9HTB5	1e-141	A0A2G9HTB5_9LAMI; Uncharacterized protein
STRING	EOX91892	1e-139	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5242	22	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	5e-51	Dof family protein