PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011097486.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 205aa    MW: 22102.6 Da    PI: 10.2575
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011097486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.34.8e-123177354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     +h+e+ErrRR+riN  +++L+++lP+       K +Ka+ L +Av+ +++L
  XP_011097486.1 31 NSHKEAERRRRKRINAHIATLKSVLPNV-----IKTDKASLLGEAVRRVREL 77
                    68*************************7.....59***********999888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.1732877IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.6E-133179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-93177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-123281IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.56E-43279No hitNo description
SMARTSM003533.5E-103483IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550213.62E-5120188No hitNo description
CDDcd048734.40E-4121187No hitNo description
Gene3DG3DSA:3.30.70.2605.9E-5121170No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MSSSATENVE NGKLHSTRSI ADEAKAAAAS NSHKEAERRR RKRINAHIAT LKSVLPNVIK  60
TDKASLLGEA VRRVRELKKA AAVAATEETG GCDLTWKVMF PSETDEVKVW QCDNSGLIKA  120
TVCCEDRPEM VVELIRALKA VEAKVVRAEM STVGGRTRSV LWVRLGVGGE SDVGLGLGKL  180
RRALKMVVDK PVQMGPKHCS AVSGS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011097486.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097486.21e-145transcription factor bHLH30-like
TrEMBLA0A2G9G2384e-74A0A2G9G238_9LAMI; Uncharacterized protein
STRINGXP_009605433.11e-57(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72832231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-21bHLH family protein