PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011098254.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

NZZ/SPL

Protein Properties

Length: 428aa MW: 46192.1 Da PI: 7.5714

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011098254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	24.4	5.2e-08	40	98	49	105
NOZZLE 49 sktaqqkqkkptlrgmgvaklerfiieeekkk..lvvatvgdtssvaaisntatrlpvp 105 s++ kqkk rg+gva+le+ ++ee++kk l va++ sv ++s++a l v XP_011098254.1 40 SRSKTAKQKKVPQRGLGVAQLEKIRLEEQQKKesLQVANILAKNSVGSSSDNAQFLAVQ 98 5555667889999************987763358999999999******988765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	1.7E-5	39	97	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence Send to blast
MAQEEHFFGC SYSGGGGSGG GGNGGGGGGG SGCGGGVSSS RSKTAKQKKV PQRGLGVAQL 60 EKIRLEEQQK KESLQVANIL AKNSVGSSSD NAQFLAVQCS KFRPGLSPLH KSDPNLEILH 120 ENSVQIPKNL NAGGGEIGVE AISSPGHENR PIWWNGEYNL PGEKQRLGTH GFAFEPQVSL 180 PYQSNSPFLP LPVVPQRSQQ FQWPCSSSSS VMNSSTGISA SSILSSQMEP PSNQSSRGNN 240 YVPSWSEEEK MVGMKRSYPF LVESQPSRSL HCNFHPSYAA SLSRSDEFDS CSNGYKAHME 300 PRNKCVRESS SNSSPQPEQN PSEVTRDKGM LNGDFLTLAP PVVVSQPSNS EHKNTLDYSG 360 YKRPELYPYE RIPSQDYAKS QIRHPGPSGL VERAVSFLPI TLQIDQTTTS VSNGNGEKTE 420 TIDHSLKL

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence Send to blast

MAQEEHFFGC SYSGGGGSGG GGNGGGGGGG SGCGGGVSSS RSKTAKQKKV PQRGLGVAQL  60
EKIRLEEQQK KESLQVANIL AKNSVGSSSD NAQFLAVQCS KFRPGLSPLH KSDPNLEILH  120
ENSVQIPKNL NAGGGEIGVE AISSPGHENR PIWWNGEYNL PGEKQRLGTH GFAFEPQVSL  180
PYQSNSPFLP LPVVPQRSQQ FQWPCSSSSS VMNSSTGISA SSILSSQMEP PSNQSSRGNN  240
YVPSWSEEEK MVGMKRSYPF LVESQPSRSL HCNFHPSYAA SLSRSDEFDS CSNGYKAHME  300
PRNKCVRESS SNSSPQPEQN PSEVTRDKGM LNGDFLTLAP PVVVSQPSNS EHKNTLDYSG  360
YKRPELYPYE RIPSQDYAKS QIRHPGPSGL VERAVSFLPI TLQIDQTTTS VSNGNGEKTE  420
TIDHSLKL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011098254.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011098254.1	0.0	uncharacterized protein LOC105176957
TrEMBL	A0A2G9G469	1e-112	A0A2G9G469_9LAMI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2123	2	3