PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011098609.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 252aa    MW: 28157.7 Da    PI: 7.0345
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011098609.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.5e-0564112254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +  + +rE+  Rd++N+ f  L + l  +    +  + Ka+iL+++++ +++L
  XP_011098609.1  64 KIHKAAREKLKRDQMNELFLDLGRTLDLD----HSNNGKASILRETIRLLREL 112
                     567789*******************9997....78999**********99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.45E-560116No hitNo description
SuperFamilySSF474597.46E-1161127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.59862112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.9E-762130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MHSYRTPVSS VYLLIAAEKS FVVKGNSFPQ SVNFYRMGSE TAHPVHDGVE IRTSKKSTGK  60
VPRKIHKAAR EKLKRDQMNE LFLDLGRTLD LDHSNNGKAS ILRETIRLLR ELLTEVDNLR  120
KENATLFSES NYVTIEKNEL LEETSALDDQ IKGLQREIDK KANCSDLNVS EPQNSASAQL  180
LEDPVAFPLV GHASESTSVV TPVFVMPLHH ESQGFPSPFS EVNMSTVPSS VSRPQPRYPS  240
SSDSWPSHIL TK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16876AREKLKRDQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011098609.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098609.10.0transcription factor bHLH47 isoform X1
TrEMBLA0A2G9I4021e-104A0A2G9I402_9LAMI; Uncharacterized protein
STRINGMigut.H00911.1.p9e-93(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43071934
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.38e-39bHLH family protein