PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011098610.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 216aa    MW: 24052 Da    PI: 6.3129
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011098610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.2e-052876254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +  + +rE+  Rd++N+ f  L + l  +    +  + Ka+iL+++++ +++L
  XP_011098610.1 28 KIHKAAREKLKRDQMNELFLDLGRTLDLD----HSNNGKASILRETIRLLREL 76
                    567789*******************9997....78999**********99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.34E-52480No hitNo description
SuperFamilySSF474595.5E-112591IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.5982676IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-72694IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MGSETAHPVH DGVEIRTSKK STGKVPRKIH KAAREKLKRD QMNELFLDLG RTLDLDHSNN  60
GKASILRETI RLLRELLTEV DNLRKENATL FSESNYVTIE KNELLEETSA LDDQIKGLQR  120
EIDKKANCSD LNVSEPQNSA SAQLLEDPVA FPLVGHASES TSVVTPVFVM PLHHESQGFP  180
SPFSEVNMST VPSSVSRPQP RYPSSSDSWP SHILTK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13240AREKLKRDQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011098610.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098609.11e-158transcription factor bHLH47 isoform X1
RefseqXP_011098610.11e-158transcription factor bHLH47 isoform X2
TrEMBLA0A2G9I4021e-104A0A2G9I402_9LAMI; Uncharacterized protein
STRINGMigut.H00911.1.p4e-93(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.33e-39bHLH family protein