PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011098771.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 479aa    MW: 52046.1 Da    PI: 6.4034
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011098771.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.22.3e-30214273159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+aed +++++tYeg+Hnh+
  XP_011098771.1 214 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpTCPVRKQVQRCAEDMSILITTYEGTHNHP 273
                     58**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-31199275IPR003657WRKY domain
SuperFamilySSF1182902.48E-27207275IPR003657WRKY domain
PROSITE profilePS5081128.575209275IPR003657WRKY domain
SMARTSM007742.1E-36214274IPR003657WRKY domain
PfamPF031067.0E-27215273IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MGDVMGCKVS DDERINMNGT CKSSEDVIKG DDEIESTETE LRGVREENLR LKNLLQQIGK  60
DYKALEMRFV DIFQQESKKN GSPIIVAPAE DDQEQELVSL RLGTSVEPKK EDVHVASGSS  120
SSCCKVICEN GELKLGMDYS LGRLETDDGS MAFRKNPGPD NCSFTGKKEE DKAGEKWPPG  180
NGLKTQRSGD DELSQTSVKR ARVCVRARCD TPTMNDGCQW RKYGQKIAKG NPCPRAYYRC  240
TVSPTCPVRK QVQRCAEDMS ILITTYEGTH NHPLPMSATA MASTTSAAAS MLLSGSSTSQ  300
PSATAAPSTH LYGPPTFYPF DNSRTQPYFL PNSSSAPFPT ITLDLTTNPA TTQGGFGLYS  360
STSRLNPRVP TTNLSFSSVD SNMGSTTVWG SGGSSYGTFP YNKDHHFLLP GKPAQELKFQ  420
SYFEMFNHAS SQQALTETLT KVITSDPSFR SVIAAAISSM AANGGTGKLN NYEKGENLG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21201275174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011098771.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098771.10.0probable WRKY transcription factor 72
TrEMBLA0A2G9HFK41e-180A0A2G9HFK4_9LAMI; Uncharacterized protein
STRINGEOY033941e-130(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA128051921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-55WRKY DNA-binding protein 72