PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011098931.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family NAC
Protein Properties Length: 240aa    MW: 27576.1 Da    PI: 9.0558
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011098931.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1072.4e-33101361128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lp GfrFhPtd+el+ +yLk+k+ + +l+ + + ++vd+++++PwdLp  +   +++ yfF+k++ +  ++     + + gyWk++gkdk+v++ 
  XP_011098931.1  10 LPIGFRFHPTDQELLLHYLKRKLYSLPLPPTLIPDHVDVFHSNPWDLPGDL---KEKRYFFCKTKMNFMNKCSLM-SSDCGYWKSSGKDKQVMAP 100
                     699************************9996667788***********554...4578*****999887655544.4688**************9 PP

             NAM  96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++ l+g+kk + f++g+++   kt+Wvmh++ l
  XP_011098931.1 101 gsgTNLLIGIKKCFLFHQGKTSPQLKTQWVMHQFCL 136
                     6544555*************9999**********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-416165IPR003441NAC domain
PROSITE profilePS5100541.38210165IPR003441NAC domain
PfamPF023654.7E-2111135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
METEQPLIKL PIGFRFHPTD QELLLHYLKR KLYSLPLPPT LIPDHVDVFH SNPWDLPGDL  60
KEKRYFFCKT KMNFMNKCSL MSSDCGYWKS SGKDKQVMAP GSGTNLLIGI KKCFLFHQGK  120
TSPQLKTQWV MHQFCLVASF TTPFFLAQKL MMQVGDWVVC RVYQRKRKAR NQVANYIKKP  180
RTLQGIRTKD HMNLRMGEEN ELGFSSAQTC CSSSCCSGIT EISCNELDEE ASSQASPCWK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-27816613169Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011098931.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098931.10.0NAC domain-containing protein 41
TrEMBLA0A022QZ798e-86A0A022QZ79_ERYGU; Uncharacterized protein
STRINGMigut.F00031.1.p1e-86(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132501318
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.13e-40NAC domain containing protein 41