PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011099177.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 284aa    MW: 30973.8 Da    PI: 10.3488
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011099177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.79e-32211268359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh 
  XP_011099177.1 211 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERAVDDPTMLIVTYEGEHNHA 268
                     99************************988****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105336.5E-17160207IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.0E-33197268IPR003657WRKY domain
PROSITE profilePS5081131.192204270IPR003657WRKY domain
SuperFamilySSF1182903.14E-27206268IPR003657WRKY domain
SMARTSM007746.3E-38209269IPR003657WRKY domain
PfamPF031062.4E-27211267IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MHVPETDYVA AADAAVNKFK RVISLLGRTR TGHARFRRAP VATSPPPSSS SSPNSVLPNT  60
STDNSTKIYC PTPIQQVPPP DYHHKLENLK ESGSKTISFS YSPVISRANS FMSSLTGADT  120
EISKQQQQPS SSSAFQIIST LSQVSNSAGK PPLSTSSSFK RKCASSENGV SGKCSPXPPS  180
RCHCSKRRKL RLKRVIRVPA ISMKMADIPP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG  240
CPARKHVERA VDDPTMLIVT YEGEHNHAIS VNAETPSTLI LESS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-22197269273WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011099177.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099177.10.0LOW QUALITY PROTEIN: probable WRKY transcription factor 7
SwissprotQ9STX02e-87WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A2G9GAI01e-141A0A2G9GAI0_9LAMI; Uncharacterized protein
STRINGPGSC0003DMT4000642561e-122(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-68WRKY DNA-binding protein 7