PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011099224.1

Organism

Sesamum indicum

Taxonomic ID

4182

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum

Family

Dof

Protein Properties

Length: 335aa MW: 35156.2 Da PI: 8.905

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011099224.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.5	3.5e-39	64	122	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ XP_011099224.1 64 SENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNT 122 57899***************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.2E-32	66	121	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	6.0E-25	67	118	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.544	67	121	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	69	105	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence Send to blast
MIQELLGGSN VSIIGGERSK LSTPVCGGIL DGSPSHSLPS SSPSPSSSST SVGTTAAAAA 60 AAASENLRCP RCDSSNTKFC YYNNYNLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK 120 NTTITTAVGK SSSAGKLKTV SQELGKSGLF SGFDHAEALS ANPILWASSQ NSHFLSLLRA 180 NQSPNPTHLP NSISVKEENA LFGSSHLSQE SSISSGGLNP RVMSLDPLAP IHLPSMGQSN 240 SLYRNQTQPA RVGIIHGEVQ NNGLQELYQR LRSSSSTSCY PENAQVILGN VASAASSTAS 300 AILESAPVAA PGEFGFWNPT ISWPTDLPTT NGAYP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_011099224.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020554970.1	0.0	dof zinc finger protein DOF1.1-like
TrEMBL	A0A4D9AF32	1e-113	A0A4D9AF32_SALSN; Uncharacterized protein
STRING	cassava4.1_031319m	1e-108	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	6e-34	TARGET OF MONOPTEROS 6