PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011099996.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family bHLH
Protein Properties Length: 236aa    MW: 25686.3 Da    PI: 8.9107
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011099996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-1254100354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      +h+e+ErrRR+riN  +++L+++lP+       K +Ka+ L ++v+ +k+L
  XP_011099996.1  54 NSHKEAERRRRKRINGHIATLKSILPNT-----IKTDKASLLGETVRLVKEL 100
                     68*************************8.....69************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.94551100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.1E-1354103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-1054100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-1355119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-1057106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2603.9E-4148210No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MFSINQSLYE AGSCSDSYAI LQGMLSSSQA DTDQNPNLIS PSFMAEAKAA AASNSHKEAE  60
RRRRKRINGH IATLKSILPN TIKTDKASLL GETVRLVKEL KKTTSELTAI DAETNGELST  120
SLTLMFPSET DDLNVCHCEN SGLIRAAFSC DDRPEMIPEL IQALKSAEAK VVRAEMSTVG  180
GRTKSVVWVK LLTGESDAGL GRLRRELKKV VMEKSISLAG SGQGLPGNKR PRYYHL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011099996.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099996.11e-175transcription factor bHLH30-like isoform X2
RefseqXP_020554626.11e-174transcription factor bHLH131-like isoform X1
RefseqXP_020554627.11e-175transcription factor bHLH30-like isoform X2
TrEMBLA0A2G9G2382e-97A0A2G9G238_9LAMI; Uncharacterized protein
STRINGMigut.H02300.1.p3e-80(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72832231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.12e-29bHLH family protein